Hexokinase [923585-6910]

Representation Video Format Ribbon MultiGif CA trace Ball-and-Stick

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Other visual representations: Create new custom MPEG of this morph Color protein by motion View interpolation animated in Protein Explorer (Rotate, color, render as desired. Requires PC/Mac, Chime) Color protein by nma flexibility View as Flickerbook Page in Adobe PDF 1.2 Color protein by b-factors 3D jmol viewer (NEW!)

Downloads and other analyses: Download interpolation as tar'red and gzipped PDB file Torsion angle analysis of morph Download interpolation as gzip'ped NMR format PDB file Proflex Analysis Helical interaction analysis of first or last frame.

GO terms associated with structures:   [ see term descriptions ] Molecular function hexokinase activity, ATP binding Biological process glycolysis

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Statistics generated for this morph [ help page ]

Display percentiles for rankable statistics versus morph set: check 1

Rankable statistics: 2ndCoreCAs 449 2ndCoreRMS 2.41169 2ndCoreRMSpostrefitting 0.951922 AlignedCoreCAs 450 AlignedCoreRMS 0.376256 Max2ndCoreDeviation 5.80783 MaxCoreDeviation 0.893691 MaxOverallDeviation 5.80783 Min2ndCoreDeviation 0.376743 MinCoreDeviation 0.0210814 MinOverallDeviation 0.0210814 RMSoverall 1.72504 kappa 3.48242 natoms 7174 nresidues 917 translation 2.51248

Other information: NHingeWindow 10 NHinges 0 TransX 1.00255 TransY 2.12027 TransZ -0.901033 hetero   inframes 2 inputchain0 A inputchain1 A inputframe0 1hkb.pdb [ PartsList ] inputframe1 1qha.pdb max_x_or_y 51.423 movie_id 923585-6910 movie_type Yale nhetatoms   nhets 0 nresatoms 7174 outframes 10 prelimsscore nan private N protein_name Hexokinase submitted-by Latisha Jefferies submitted-date Mon Oct 5 17:01:57 PDT 2020 submitted-email latisha.jefferies@usafa.edu x0ToCentroidDistance 27.5315 x0X -7.39171 x0Y -5.33383 x0Z -25.9787

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Alignment of Protein Structures from Amino Acids in their SEQRES decks:

View alignment as nicely formated Alscript page (PDF format)

1>P1;1qha.pdb.....1.MIAAQLLAYYFTELKDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHE
2>P1;1hkb.pdb.....1.MIAAQLLAYYFTELKDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHE

1>P1;1qha.pdb...101.KNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYD
2>P1;1hkb.pdb...101.KNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYD

1>P1;1qha.pdb...201.ANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGM
2>P1;1hkb.pdb...201.ANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGM

1>P1;1qha.pdb...301.YLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDN
2>P1;1hkb.pdb...301.YLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDN

1>P1;1qha.pdb...401.KGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLR
2>P1;1hkb.pdb...401.KGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLR

1>P1;1qha.pdb...501.KQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGF
2>P1;1hkb.pdb...501.KQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGF

1>P1;1qha.pdb...601.TFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ
2>P1;1hkb.pdb...601.TFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ

1>P1;1qha.pdb...701.GQMCINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQV
2>P1;1hkb.pdb...701.GQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQV

1>P1;1qha.pdb...801.RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKG
2>P1;1hkb.pdb...801.RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKG

1>P1;1qha.pdb...901.AALITAVGVRLRTEASS
2>P1;1hkb.pdb...901.AALITAVGVRLRTEASS

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Copyright 1995-2005 M. Gerstein, W. Krebs, S. Flores, N. Echols, and others
Email: Mark.Gerstein _at_ yale.edu